The humble stock VM26mm Mikuni is a wonderful little carb and works very well from stock builds to quite extensively modded engines using expansion chambers designed for the low/mid power range.
When one fits an expansion chamber that favours the mid/high range, greater benefits can be obtained by using larger bore and/or flat slide models.
Increasing the displacement of air does call for a larger bore unit to allow for more precise jetting.
The modifications KOR have done to my engine do not really call for such a large bore setup, but I need to experiment with the TMXX 35mm D slide to see if I can wring some more power from it.
Depending on what modifications you have done and what you expect from them I believe that Mikuni has them covered.
http://www.amazon.com/Mikuni-Series-Slide-Carburetor-VM28-418/dp/B000GZO5EG
http://www.powersportsplace.com/sea...-series-carburetors/carburetor-bore-size/28mm
http://www.carbparts.com/mikuni/mikuni_atv.htm