if you not running a spacer with a stroker and instead mill the top of the barrel, you are decreasing your effective compression, your compression on a 2stroke only begins when your exhaust port closes, 33mm on a stock jug (may be 31mm, not sure) from the top, so basically your stock motor has the compression : pi x r2 x h = pi x 3.3 x 3.3 = 112.28cc so if you decrease the height from the top of the cylinder to the top of the exhaust port, your effective comp becomes less, as it is, a blaster actually has the compression of a 112.28cc bike, now there is a point to argue with your 4stroke buddies!

milling the barrel at the top a lot will actually make you technical motor "size" less!
The only reason i believe the barrel should be skimmed is to correct deck height to about 0.63mm below deck, but only involving a minimal amount of material removal, enough to get your port timing in spec with a 200cc, which a stock blaster is not.