In that first pic at the very top right corner it looks like the spacer that goes under the main gear inside the crank seal.
Also it looks like the spring washer that goes under the clutch basket in the bottom left corner of the first pic and a glimpse of it in the third pic. It's kind of blueish.
At the bottom of the first pic there are a bunch of nuts. Two without flanges and three with flanges. The larger of the two without flanges goes inside the clutch basket to tension that aforementioned spring washer and the smaller of the two nuts goes on the counterbalance. Also the two screwed up flat washers that are all mangled are the stake washers for those two nuts. Throw those away and order new ones. They are like $8 and keep your clutch side from coming apart and destroying itself. The three flanged nuts... one goes on the swingarm pivot bolt, one goes on the kick starter. I can't think of the other one but I'm sure it'll come to me.
In the fifth picture there are a few screws with unusually thick washers on them. There should be five of those. Those are the clutch bolts that go over the pink painted springs to tension the clutch up. Also, as mentioned the long slender rod with the dimple in the end is the clutch pushrod. There is another piece to it which is pictured but all apart. In the first pic the long slender rod is laying there with two more rods laying above it. Those are the "outer" pushrod (there are two when you only need one) One has a nut on it, the other doesn't. Somewhere in your pile (not in the specific pictures) there should be a threaded "washer" with four little points on it. Those rods with the threads on them stick through the threaded washer and adjust the clutch. Also, in the fifth picture on the far right side, the washer with the rub park on it goes with that slender threaded rod under the nut. It's part of that assembly.