The exhaust depends on what type of riding you plan on doing. They're runed for different engine RPM's and flows. Matching the pipe, porting, and riding style are crucial for getting the most out of the setup.
If you are mainly in the woods, tight trails, mudding, or general riding (not engine screaming) the FMF is the exhaust of choice. It's a "mid" pipe (gives a decent bottom end with a LOT power power out through the middle of the RPM range but not a huge amount of top end power).
If you are trail riding and light racing (open fields and light trails but some high speed stuff) the toomey pipe might be more up your alley. It's a "mid-top" pipe with decent bottom end and plenty of pull near the top.
If you are dune riding or riding open trails or racing high speed, the power pros/CT/dynoport/ (the right bends) might be right for you. They don't offer as much down low... but when they get onto the pipe it's harder than the others. They offer LOTS up top.
Once you know what you're going to be using it for, then you can make a decision on type of pipe and porting to get done.